QIIME 2 Developer DocumentationΒΆ

  • Quickstart
  • Architecture Overview
  • The Plugin Object and Entrypoints
  • Actions
    • Methods
    • Visualizers
    • Pipelines
    • Transformers
  • How Data is Stored
    • Anatomy of an Archive
    • Archive Versions
    • Semantic and Primitive Types
    • File Formats and Directory Formats
    • Decentralized Provenance Tracking
  • Using Metadata
  • Coordinating With Other Plugins
  • Testing Plugins
  • Publishing a Plugin on Library
    • Library Publishing Tutorial
    • Packaging Infrastructure
  • Plugin tutorials
    • Developing a plugin for dummies
    • Publishing your plugin on conda
    • Updating your qiime2 plugin
    • Writing Usage Examples for your QIIME 2 plugin
  • Internal Details
    • Garbage Collection
    • Metaprogramming
    • Notes on Pickling
    • Transformation API
    • Type System Internals
  • API Reference
    • Plugin API
    • Usage API
      • Usage API (for example authors)
      • Usage API (for interface drivers)
      • Premade Usage Drivers
    • Interface Development & The Artifact API (SDK)
    • Metadata
    • Miscellaneous Utilities
  • Glossary
  • Getting Help

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Navigation

  • Quickstart
  • Architecture Overview
  • The Plugin Object and Entrypoints
  • Actions
  • How Data is Stored
  • Using Metadata
  • Coordinating With Other Plugins
  • Testing Plugins
  • Publishing a Plugin on Library
  • Plugin tutorials
  • Internal Details
  • API Reference
  • Glossary
  • Getting Help

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